Construction of Listeria monocytogenes mutants by allelic exchange has been laborious and time consuming due to lack of proficient selection markers for the second recombination event. That is, a marker conveying substance sensitivity to the bacteria bearing it, enabling the exclusion of merodiploids and selection for plasmid loss. In order to address this issue, we engineered a mutated counterselection marker based on the Bacillus subtilis Phenylalanyl-tRNA synthetase gene (pheS*)(A309G). This mutation renders the phenylalanine-binding site of the enzyme more promiscuous and allows the binding of the toxic p-chloro-phenylalanine analog (p-Cl-phe) as a substrate. When pheS* is introduced to L. monocytogenes and highly expressed under a constitutively active promoter, the bacteria become sensitive to p-Cl-phe supplemented to the media. This enabled us to utilize pheS* as a negative selection marker and generate a novel, efficient suicide vector for allelic exchange in L. monocytogenes. Furthermore, such an effective counterselection marker, that does not require any background genomic alterations, is a potent tool that can be modularly used to construct various selection systems such as in genetic screens. We expect this counter selection marker to be a valuable genetic tool in L. monocytogenes and other Gram-positive bacteria.1–3