As the primary interface for resource acquisition, plant roots play a key role in growth regulation. Evidence from rice, maize and sorghum demonstrates that the below-ground plant architecture significantly impacts plant performance under abiotic constraints. Roots assume critical functions in water uptake, nutrient acquisition and anchorage, an essential characteristic to maintain plant stability under increased grain load. Despite their fundamental importance, knowledge about genetic control of root growth in major grain crops is limited and very little is known about interactions between below-ground and above-ground plant development. Here we demonstrate that VERNALIZATION1 (VRN1), a key regulator of flowering behavior in cereals, also modulates root architecture in wheat and barley. Associations of VRN1 haplotypes to root growth habit were discovered in wheat by genome-wide association studies, and confirmed by allelic analyses in wheat and barley populations. Functional characterization in transgenic barley confirmed that VRN1 influences root growth angle directly, via gravitropism. These discoveries provide unexpected insight into underground functions of a major player in the well-characterized flowering pathway, revealing the intersection of above-ground gene regulation with the largely unexplored genetic architecture of plant root development. Understanding the pleiotropic involvement of this key developmental gene in overall plant architecture will help to breed cereal cultivars adapted to specific environmental scenarios.