Human tissues and fluids contain large concentrations of zinc, which fulfills crucial roles in cell functionality, growth, proliferation and survival. Zinc may also be found as a free ion, Zn2+, in organelles. Particularly, Zn2+ is selectively concentrated in secretory granules of the salivary glands. In the salivary duct cell line, HSY, extracellular Zn2+ activates a Zn2+ sensing receptor, ZnR/GPR39. Based on the role of Zn2+ in regulating salivary contents, we hypothesized that ZnR/GPR39 may regulate ion transport in these cells. Cellular pH imaging studies, using NH4+ as a surrogate to K+, suggest that ZnR/GPR39 signaling leads to enhanced K+ transport. We therefore studied the role of the Na+/K+ ATPase pump, which is present on basolateral plasma membrane and regulates the osmolarity of the cytosol by controlling intracellular solute concentration. The ZnR/GPR39-dependent ion transporter activity is reduced by using a specific inhibitor of the pump Ouabain. Silencing the α1 subunit of Na+/K+ ATPase using siRNA constructs abolished the enhanced ion transporter activity. To study the link between the ZnR/GPR39 and Na+/K+ ATPase pump activity we used cyclosporine A, an inhibitor of calcineurin. Zn2+-dependent upregulation of the ion transporter activity was partially attenuated suggesting that FXYD-dependent activation may regulate the pump activity. Thus we conclude that ZnR/GPR39 activates the Na+/K+ ATPase, and may regulate duct secretory activity, that is important for regulation of salivary contents.