ILANIT 2023

Metabolic Regulation of SARS-CoV-2 Infection

Avner Ehrlich 1,2 Konstantinos Ioannidis 1 Makram Nasar 3 Ismaeel Abu Alkian 3 Nofar Atari 4 Limor Kliker 4 Nir Rainy 7 Matan Hofree 5 Sigal Shafran Tikva 6 Inbal Houri 8 Arrigo Cicero 9 Chiara Pavanello 10 Cesare Sirtori 10 Jordana Cohen 11 Julio Chirinos 11 Lisa Deutsch 12 Merav Cohen 1,2 Amichai Gottlieb 3 Adina Bar-Chaim 7 Oren Shibolet 8 Michal Mandelboim 4 Shlomo Maayan 3 Yaakov Nahmias 1,2
1Grass Center for Bioengineering, The Hebrew University of Jerusalem, Israel
2Department of Cell and Developmental Biology, The Hebrew University of Jerusalem, Israel
3Division of Infectious Diseases, Barzilai Medical Center, Israel
4Central Virology Laboratory, Ministry of Health and Sheba Medical Center, Israel
5Klarman Cell Observatory, The Broad Institute of Harvard and MIT, USA
6Hadassah Research and Innovation Center, Hadassah Medical Center, Israel
7Laboratory Division, Shamir (Assaf Harofeh) Medical Center, Israel
8Sourasky Medical Center, Department of Gastroenterology, Israel
9University Hospital, IRCSS S.Orsola-Malpighi, Italy
10Centro Dislipidemie, Niguarda Hospital, Italy
11Perelman School of Medicine, University of Pennsylvania, USA
12BioStats, Statistical Consulting Ltd, Israel

Viruses are efficient metabolic engineers that actively rewire host metabolic pathways to support their lifecycle, presenting attractive metabolic targets for intervention. Here we chart the metabolic response of lung epithelial cells to SARS-CoV-2 infection in primary cultures and COVID-19 patient samples. Virus infection produced transcriptional changes associated with increased glycolysis and lipid accumulation. Metabolism-focused drug screen showed that fenofibrate reversed lipid accumulation and blocked SARS-CoV-2 replication through a PPARα-dependent mechanism in both alpha and delta variants. Analysis of 3,233 Israeli patients hospitalized due to COVID-19 supported in vitro findings. Patients taking fibrates showed significantly lower markers of immunoinflammation and faster recovery. Additional corroboration was received by comparative epidemiological analysis from cohorts in Europe and the United States. A subsequent prospective non-randomized interventional open-label study was carried out on 15 patients hospitalized with severe COVID-19. The patients were treated with 145 mg/day of nanocrystallized fenofibrate in addition to standard-of-care. Patients receiving fenofibrate demonstrated a rapid reduction in inflammation and a significantly faster recovery compared to patients admitted during the same period. Taken together, our data suggest that pharmacological modulation of PPARα should be strongly considered as a potential therapeutic approach for SARS-CoV-2 infection and emphasizes the need to complete the study of fenofibrate in large randomized controlled clinical trials.