Susceptibility to structural valve deterioration is one of the major drawbacks of bioprosthetic heart valves (BHVs). N-glycolylneuraminic acid (Neu5Gc) is an immunogenic dietary-carbohydrate antigen in humans because of inactivation of the gene encoding CMP-N-acetylneuraminic acid hydroxylase (CMAH), and all humans have circulating anti-Neu5Gc antibodies. We hypothesized that interaction of anti-Neu5Gc antibodies with Neu5Gc on BHVs could lead to immune response resulting in valve deterioration through calcification. We demonstrate Neu5Gc in both native calcified human valves as well as in calcified-BHVs, explanted from human patients, by HPLC and immunohistochemistry. Furthermore, anti-Neu5Gc IgGs were purified from native calcified human valves, validated by a glycan microarray. In the Neu5Gc-free Cmah-KO mouse model, anti-Neu5Gc antibodies promoted calcium deposits in subcutaneous implanted BHV discs, both with passive transfer of affinity-purified human anti-Neu5Gc IgGs, and by active-immunization of Cmah-KO mice with Neu5Gc-containing glyconanoparticles. Thus, co-existence of Neu5Gc/anti-Neu5Gc likely mediate BHV structural valve deterioration.