Mycobacterium tuberculosis (Mtb) exposure drives antibody responses, but whether patients with active tuberculosis elicit protective antibodies, and against which antigens, is still unclear. We generated monoclonal antibodies from memory B cells of one patient to investigate the B cell responses during active infection. The antibodies, members of four distinct B cell clones, were directed against the Mtb phosphate transporter subunit, PstS1. Antibodies p4-36 and p4-163 reduced Mycobacterium bovis-BCG and Mtb levels in an ex vivo human whole blood growth inhibition assay in an FcR-dependent manner; meanwhile, germline versions of p4-36 and p4-163 did not bind Mtb. Crystal structures of p4-36 and p4-170 (a clonal variant of p4-163), complexed to PstS1, were determined at of 2.1Å and 2.4Å resolution, respectively, to reveal two distinctive PstS1epitopes. Lastly, a prophylactic p4-36 and p4-163 treatment in Mtb-infected Balb/c mice reduced bacterial lung burden by 50%. Sera of PstS1-immunized mice competed mostly with antibody p4-163, pointing towards the immunodominance of the p4-163 epitope over p4-36 epitope. Our study shows that inhibitory anti-PstS1 B cell responses arise during active tuberculosis and reveals new neutralizing sites on the bacteria.