MUTATIONAL ANALYSIS OF CONSERVED REGIONS OF THE LEVANSUCRASE LSC3 FROM PSEUDOMONAS SYRINGAE DC3000

Triinu Visnapuu 1 Karin Mardo 1 Heiki Vija 2 Andres Mäe 1 Tiina Alamäe 1
1Department of Genetics, Institute of Molecular and Cell Biology, University of Tartu, Tartu
2Laboratory of Molecular Genetics, National Institute of Chemical Physics and Biophysics, Tallinn

Levansucrases (EC 2.4.1.10) are bacterial extracellular enzymes that are classified to family 68 of glycoside hydrolases (http://www.cazy.org). They split sucrose and synthesize levan, a b-(2,6)-linked polyfructan. Structure-function relationships of levansucrases from Pseudomonas bacteria are poorly studied though they are promising catalysts for biotechnology and their specific role in plant pathogenesis is not yet completely solved [1, 2].

Levansucrase Lsc3 encoded by lsc3 (lsc-3) gene of Pseudomonas syringae pv. tomato DC3000 is a promising catalyst for biotechnology due to its high catalytic activity, stability and the ability to produce several biotechnologically applicable products such as levan, fructooligosaccharides (FOS) and heterooligofructans [1, 2, 3]. To initiate the structure-function study of Pseudomonas-derived levansucrases, we conducted mutational analysis of the protein. We confirmed experimentally that Asp62, Asp219 and Glu303 act as catalytic triad residues of Lsc3. To disclose other catalytically important positions of the protein, conservation analysis of levansucrases was performed. Residues from highly conserved regions adjacent to catalytic triad were mutated site-specifically to reveal their potential functions. In total, sixteen single amino acid replacement mutants of twelve different positions were constructed. The mutant proteins were purified and biochemically characterized by determining affinity to substrates, catalytic efficiencies, FOS and levan synthesis. In addition to catalytic triad, we revealed several positions of Lsc3 that are highly relevant for the catalysis and synthesis of reaction products.
Acknowledgements
This study was supported by grant GLOMR9072 from Estonian Science Foundation and EU project Functional Food Ingredients 3.2.071.12-0041 (SLOMR12215T) managed by Archimedes Foundation.

References

[1] Visnapuu T. et al, 2011, J Biotechnol 155, 338-49

[2] Alamäe T. et al, 2012, Carbohydr Chem, Vol 38. RSC, Cambridge, UK, 176-91

[3] Visnapuu, T. et al, 2009, Rapid Commun Mass Spectrom 23, 1337-46









 




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