HIGH-THROUGHPUT SCREENING IDENTIFIES SMALL MOLECULES THAT SELECTIVELY ELIMINATE TUMORIGENIC HUMAN PLURIPOTENT STEM CELLS AND PREVENT TERATOMA FORMATION

Uri Ben-David 1 Qing-Fen Gan 2 Tamar Golan-Lev 1 Payal Arora 2 Ofra Yanuka 1 Yifat Oren 1 Alicia Leikin-Frenkel 3 Martin Graf 4 Ralph Garippa 2 Markus Boehringer 4 Gianni Gromo 4 Nissim Benvenisty 1
1Department of Genetics, The Hebrew University, Jerusalem
2RDT, Hoffmann-La Roche, New-Jersey
3Sackler School of Medicine, Tel-Aviv University, Tel-Aviv
4HQ, F. Hoffmann-La Roche AG, Basel

Human pluripotent stem cells (hPSCs) hold great promise for cell therapy treatments, as they can differentiate into all the cell types of the human body. However, the clinical use of hPSCs is hindered by the tumorigenic risk from residual undifferentiated cells. In this study, we performed a high-throughput screen of over 52,000 small molecules, and identified 15 pluripotent cell-specific inhibitors (PluriSIns), 9 of which share a common structural moiety. The effect of the PluriSIns is extremely selective, as they eliminate hPSCs rapidly and robustly while completely sparing a large array of progenitor and differentiated cells of all germ layers and developmental stages. Cellular and molecular analyses demonstrated that the most selective compound, PluriSIn#1, induces ER stress, protein synthesis attenuation, and apoptosis in hPSCs. Further characterization identified this molecule as an inhibitor of stearoyl-coA desaturase (SCD1), the key enzyme in oleate biosynthesis, revealing a previously unknown unique role for lipid metabolism in hPSCs. Remarkably, exogenous supplementation of oleate completely rescued the PluriSIn#1-induced cell death, demonstrating that oleate depletion is the direct cause of hPSC death following exposure to PluriSIn#1. Of note, structurally-similar PluriSIns were found to exert their cytotoxic effect on hPSCs through the same mechanism of action. PluriSIn#1 was also cytotoxic to mouse pluripotent stem cells and to mouse blastocysts, indicating that the dependence on oleate is inherent to the pluripotent state, and is evolutionarily-conserved. Finally, application of PluriSIn#1 prevented teratoma formation from tumorigenic undifferentiated hPSCs. This novel method to eliminate undifferentiated cells from culture should thus enable the generation of pure differentiated cultures and increase the safety of hPSC-based therapies.

* This work has been recently published: Ben-David et al. Cell Stem Cell 2013.







 




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